Insertion junction: LMJ.RY0402.080670_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.080670
Chromosome:chromosome 5
Location:907712
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre05.g247300 (1 of 1) PF13432//PF13489 - Tetratricopeptide repeat (TPR_16) // Methyltransferase domain (Methyltransf_23) 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTATTAAGTGCTTGTACAACTGGTATTG
Internal bar code:TCTTTCAATCCGTTGTCCTGAC

Confirmation - LEAP-Seq

LEAP-Seq distance:344
LEAP-Seq percent confirming:99.6517
LEAP-Seq n confirming:22316
LEAP-Seq n nonconfirming:78
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTTGGAAGGAATGGAGA
Suggested primer 2:CTCCTGTCACCTGCTGCATA