Insertion junction: LMJ.RY0402.080716_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.080716
Chromosome:chromosome 9
Location:546957
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g403850 (1 of 30) PTHR24349:SF79 - NITROGEN NETWORK KINASE 1 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGTTGGGCCGAACGGGAGGTAGGCGTGAC
Internal bar code:GCGCGAAGTCACAACTCAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:615
LEAP-Seq percent confirming:99.0149
LEAP-Seq n confirming:6131
LEAP-Seq n nonconfirming:61
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTTTCTCAGTGATTCCGA
Suggested primer 2:TGCAGTCACCCTTGACTCTG