Insertion junction: LMJ.RY0402.080781_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.080781
Chromosome:chromosome 9
Location:7927171
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g417250 ELG27 Exostosin-like glycosyltransferase 27; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGAGCAAGGGCGAGCGCACACAAGGGAGGC
Internal bar code:TAGTCAAGGGGTCAGGTTTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:703
LEAP-Seq percent confirming:99.0244
LEAP-Seq n confirming:203
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAAAGCATGCTGGAAGTT
Suggested primer 2:ACTGCGGGACAAGAGAAAGA