Insertion junction: LMJ.RY0402.080873_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.080873
Chromosome:chromosome 1
Location:5933081
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre01.g042300 SRR6 (1 of 1) IPR001190//IPR009003//IPR017448 - SRCR domain // Peptidase S1, PA clan // SRCR-like domain; Scavenger receptor cysteine rich (SRCR) protein 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGATGCACACAGTGCTGCACAATCAGCAG
Internal bar code:GCCTAGACGTCTCCACACCCAAA

Confirmation - LEAP-Seq

LEAP-Seq distance:877
LEAP-Seq percent confirming:96.5517
LEAP-Seq n confirming:28
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGGACAGGATAGCTGCAGGA
Suggested primer 2:GGTGCCTATCTAGCAGTCGC