Insertion junction: LMJ.RY0402.080938_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.080938
Chromosome:chromosome 16
Location:2071081
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g657350 SNRK2I (1 of 4) PTHR24343//PTHR24343:SF167 - SERINE/THREONINE KINASE // SUBFAMILY NOT NAMED; snRK1 family in Chlamydomonas, subgroup 2 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACATACTTGGGGGAATGGCCTGCGGCGGCG
Internal bar code:GCTCGAGGTCAAGTGCGGAACT

Confirmation - LEAP-Seq

LEAP-Seq distance:432
LEAP-Seq percent confirming:97.5758
LEAP-Seq n confirming:161
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGACAGCATTCAACTTTC
Suggested primer 2:CAGCATCGAGACCATCAAGA