Insertion junction: LMJ.RY0402.080960_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.080960
Chromosome:chromosome 11
Location:567501
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467608 (1 of 4) IPR003882//IPR008752 - Pistil-specific extensin-like protein // Peptidase M11, gametolysin intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGAGGGGGAGCAGGTCGGCGTGTGTTCA
Internal bar code:AAGCATACACGTACGTCCTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:866
LEAP-Seq percent confirming:99.0625
LEAP-Seq n confirming:1585
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTACCCCTACCCCAACTA
Suggested primer 2:TGTCATACACACACGCCCTT