Insertion junction: LMJ.RY0402.081004_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.081004
Chromosome:scaffold 18
Location:139877
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre18.g749147 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGGGCGAGGGGGAGGTGTTGTGATGCG
Internal bar code:CCCTGGAGCAGAGAACAGTGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:146
LEAP-Seq percent confirming:87.2558
LEAP-Seq n confirming:2814
LEAP-Seq n nonconfirming:411
LEAP-Seq n unique pos:23

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGACTGGGAGTTGTCGCT
Suggested primer 2:ACGCACACCTGTTTGAAGTG