Insertion junction: LMJ.RY0402.081040_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.081040
Chromosome:chromosome 3
Location:4055823
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre03.g172500 PTO2,PTOX2 (1 of 2) K17893 - ubiquinol oxidase (AOX1, AOX2); Plastid terminal oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGAGGGACAAACACACCGCCACTGACGAC
Internal bar code:GAGTAATCATCCCGGACATCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:30
LEAP-Seq percent confirming:98.0836
LEAP-Seq n confirming:563
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACGTGAACTCCTGAACCCAC
Suggested primer 2:ACCTTCGCTCCACACCATAC