Insertion junction: LMJ.RY0402.081141_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.081141
Chromosome:chromosome 2
Location:6199868
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre02.g113850 PBGD2,HMBS,HEM3 (1 of 1) PTHR11557//PTHR11557:SF0 - PORPHOBILINOGEN DEAMINASE // PORPHOBILINOGEN DEAMINASE; Porphobilinogen deaminase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGTTTTGCAAGGTGCTATTGTTGGTTCTG
Internal bar code:GGTATTTGCATGTTGCATGTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:328
LEAP-Seq percent confirming:68.9516
LEAP-Seq n confirming:171
LEAP-Seq n nonconfirming:77
LEAP-Seq n unique pos:1

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCCTTACTTGGCATCCTG
Suggested primer 2:AGCAGCAGGAGCAGGAGTAG