Insertion junction: LMJ.RY0402.081176_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.081176
Chromosome:chromosome 5
Location:253611
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g233650 FXL9 (1 of 2) IPR000014//IPR011990 - PAS domain // Tetratricopeptide-like helical domain; FixL-like PAS domain protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGCACATACCTGCAGGTCCAGCGACAACA
Internal bar code:AAGGACGGGGTTGTTGCTGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:683
LEAP-Seq percent confirming:98.9685
LEAP-Seq n confirming:3358
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:CTACCAAGGTCTGGCATCGT
Suggested primer 2:TCCAGCGCTACCAGATCTTT