Insertion junction: LMJ.RY0402.081227_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.081227
Chromosome:chromosome 1
Location:6780624
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g048850 (1 of 1) PF01342//PF01388 - SAND domain (SAND) // ARID/BRIGHT DNA binding domain (ARID) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGGAGGGGGTAAGGCATGATGCGGGTGA
Internal bar code:AATGAGATGCCCCGGCTTCGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:468
LEAP-Seq percent confirming:98.5204
LEAP-Seq n confirming:2730
LEAP-Seq n nonconfirming:41
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGCTAAGAAAGTTTGGGA
Suggested primer 2:TCATGATGGCTGCTGTTAGC