Insertion junction: LMJ.RY0402.081311_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.081311
Chromosome:chromosome 9
Location:6976744
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre09.g410700 MDN5,MDH5 (1 of 1) 1.1.1.82 - Malate dehydrogenase (NADP(+)) / NADP-linked malate dehydrogenase; NADP-Malate Dehydrogenase 5 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCGATCCCTGCCTCCAGGTGTCCATCGG
Internal bar code:CTTGCTCGGCGACCAACCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:584
LEAP-Seq percent confirming:98.9628
LEAP-Seq n confirming:1145
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:GGCTGACCGAGGTGTAGAAC
Suggested primer 2:AAGTACCCAGCAAACATGGC