Insertion junction: LMJ.RY0402.081446_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.081446
Chromosome:chromosome 1
Location:927913
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g005001 CPLD9 Conserved in the Plant Lineage and Diatoms 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGAGCGCGCAACAGCATTTCAGCCCGCA
Internal bar code:CGAACGTTTTCTGACCGTCTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1043
LEAP-Seq percent confirming:99.5246
LEAP-Seq n confirming:5234
LEAP-Seq n nonconfirming:25
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTCAGGAAGTTCTTGCG
Suggested primer 2:AGACCCTGTGTTCCGTCAAC