Insertion junction: LMJ.RY0402.081456_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.081456
Chromosome:chromosome 10
Location:2169466
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g433650 TMC3 (1 of 4) 2.1.1.178 - 16S rRNA (cytosine(1407)-C(5))-methyltransferase; putative tRNA (cytosine-5)-methyltransferase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACGTACGCAGGCGTGAGTCCATGTCCTAC
Internal bar code:CCGCGGGAACACATCCGCGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:166
LEAP-Seq percent confirming:98.7138
LEAP-Seq n confirming:614
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTGGAGCAAGGTCTGGAG
Suggested primer 2:TTATGGAAACCAAACCCCAG