Insertion junction: LMJ.RY0402.081494_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.081494
Chromosome:chromosome 11
Location:1794600
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre11.g467500 (1 of 1) PF05664 - Plant family of unknown function (DUF810) (DUF810) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGGAGCCGTGAAAATATGAAGCCGTGGCG
Internal bar code:CCTTGCGCCGAACCGCGTTAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:163
LEAP-Seq percent confirming:98.0263
LEAP-Seq n confirming:149
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:CCATTCACTCCCACCCTCTA
Suggested primer 2:GATCACCCCTTGTGACGAGT