Insertion junction: LMJ.RY0402.081538_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.081538
Chromosome:chromosome 5
Location:2972909
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g238322 TSW2 (1 of 2) 6.1.1.2 - Tryptophan--tRNA ligase / Tryptophanyl-tRNA synthetase; Putative tryptophanyl-tRNA synthetase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAGAGGAGGCGGGGATGACAGGAAAACGA
Internal bar code:GGCGGCCCATTACGGTCTTTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:389
LEAP-Seq percent confirming:98.3973
LEAP-Seq n confirming:5157
LEAP-Seq n nonconfirming:84
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:CCGTTGTTGGTCCTCCTAAA
Suggested primer 2:ATCAGAAACCCGACTGCAAC