Insertion junction: LMJ.RY0402.081588_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.081588
Chromosome:chromosome 16
Location:2103104
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g657750 CCD2 Carotenoid cleavage dioxygenase; (1 of 3) IPR005404 - Potassium channel, voltage dependent, Kv3.3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAAAAAACCCGCCACCAGCCACTAGAACA
Internal bar code:GGTGGGCTGTCGGCTAGTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:958
LEAP-Seq percent confirming:98.1278
LEAP-Seq n confirming:3040
LEAP-Seq n nonconfirming:58
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCAACGGCTATGAGTT
Suggested primer 2:ATTTGGTTCAGTTTCGGCTG