Insertion junction: LMJ.RY0402.081588_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.081588
Chromosome:chromosome 16
Location:2103120
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre16.g657750 CCD2 Carotenoid cleavage dioxygenase; (1 of 3) IPR005404 - Potassium channel, voltage dependent, Kv3.3 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCGGACCTGGCTAGCCACACACGCCATAT
Internal bar code:ACACGACGCGTGATCTAATGCG

Confirmation - LEAP-Seq

LEAP-Seq distance:261
LEAP-Seq percent confirming:10.5529
LEAP-Seq n confirming:376
LEAP-Seq n nonconfirming:3187
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGCAGCAACGGCTATGAGTT
Suggested primer 2:ATTTGGTTCAGTTTCGGCTG