Insertion junction: LMJ.RY0402.081746_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.081746
Chromosome:chromosome 13
Location:233254
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre13.g563700 FAP369 Flagellar Associated Protein 369; (1 of 1) IPR001680//IPR011047//IPR017986//IPR027417 - WD40 repeat // Quinonprotein alcohol dehydrogenase-like superfamily // WD40-repeat-containing domain // P-loop containing nucleoside triphosphate hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGCGGGCGGGGGCGTGTGTGTGTGTGTGT
Internal bar code:CCCTCGGGCCCATAGTGCGTCT

Confirmation - LEAP-Seq

LEAP-Seq distance:186
LEAP-Seq percent confirming:43.5463
LEAP-Seq n confirming:5037
LEAP-Seq n nonconfirming:6530
LEAP-Seq n unique pos:25

Suggested primers for confirmation by PCR

Suggested primer 1:CCAGCCCAAACTAAACCAAA
Suggested primer 2:CACACGCACATGATTCCTTC