Insertion junction: LMJ.RY0402.081778_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.081778
Chromosome:chromosome 1
Location:6779089
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g048850 (1 of 1) PF01342//PF01388 - SAND domain (SAND) // ARID/BRIGHT DNA binding domain (ARID) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATGACAGCGGCGGCAACGGCGGTCCGGGCG
Internal bar code:GGTATGGGCGCTGGAAGCACTC

Confirmation - LEAP-Seq

LEAP-Seq distance:142
LEAP-Seq percent confirming:53.1429
LEAP-Seq n confirming:93
LEAP-Seq n nonconfirming:82
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TCCCAAACTTTCTTAGCGGA
Suggested primer 2:TTCAGTGCCCCTCCATAGTC