Insertion junction: LMJ.RY0402.081949_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.081949
Chromosome:chromosome 3
Location:4850395
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre03.g179100 UFD1b UFD1b homolog; (1 of 1) PF00789//PF03152 - UBX domain (UBX) // Ubiquitin fusion degradation protein UFD1 (UFD1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGGGCTGGGCGCGGGCGGCGGCGGTGAGG
Internal bar code:TAGATCACTCACTGTTTGTGCT

Confirmation - LEAP-Seq

LEAP-Seq distance:322
LEAP-Seq percent confirming:62.993
LEAP-Seq n confirming:543
LEAP-Seq n nonconfirming:319
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGCTAAGGCATGCAAAG
Suggested primer 2:TCCCAATCCCACTCTCACTC