Insertion junction: LMJ.RY0402.082028_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.082028
Chromosome:chromosome 9
Location:3270283
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g387949 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTCTGCAAAGTCAGGCATTTATGATGAC
Internal bar code:GATAAAGGCAGGGACGGCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:483
LEAP-Seq percent confirming:82.5718
LEAP-Seq n confirming:1753
LEAP-Seq n nonconfirming:370
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCTTGTGTAGTCGCGGTGTA
Suggested primer 2:ATAAAACCTGCACACCTGGC