Insertion junction: LMJ.RY0402.082103_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.082103
Chromosome:chromosome 8
Location:3376780
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre08.g374250 SAG1 (1 of 80) IPR003882 - Pistil-specific extensin-like protein; Plus agglutinin protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGGCTTTGGGAACCGGGAAGCAAGGTGTT
Internal bar code:CCGATATGTGCTAACCCGGCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:228
LEAP-Seq percent confirming:62.9456
LEAP-Seq n confirming:1077
LEAP-Seq n nonconfirming:634
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:ATACGGCACACAGCACACAT
Suggested primer 2:TAAGCAGGAGGAGTGGAGGA