Insertion junction: LMJ.RY0402.082441_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.082441
Chromosome:chromosome 9
Location:1904985
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g395300 (1 of 1) PTHR11736//PTHR11736:SF14 - MELANOMA-ASSOCIATED ANTIGEN MAGE ANTIGEN // MAGE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCTTCCCTCTTCCCTGCCCCTCCCCTCCCT
Internal bar code:CCGCCGCGTATCCCCAAGGCAG

Confirmation - LEAP-Seq

LEAP-Seq distance:153
LEAP-Seq percent confirming:22.3725
LEAP-Seq n confirming:215
LEAP-Seq n nonconfirming:746
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGACAGGATCGAACAAAC
Suggested primer 2:GGAAGGAGAGCAGTGTCTGG