Insertion junction: LMJ.RY0402.082559_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.082559
Chromosome:chromosome 9
Location:7514244
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g414000 VTE8,HPT1 (1 of 1) 2.5.1.116 - Homogentisate geranylgeranyltransferase / HGGT; homogentisate phytyltransferase/ prenyltransferase 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GATTGATGAAGCATGTTGCTGCGTCGGTCG
Internal bar code:CCCCTTGTACCGACGTTTACGT

Confirmation - LEAP-Seq

LEAP-Seq distance:500
LEAP-Seq percent confirming:99.4206
LEAP-Seq n confirming:5491
LEAP-Seq n nonconfirming:32
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TCCGGGATGTCCAATATGAT
Suggested primer 2:TAACAATGGGCTTCTTTGCC