Insertion junction: LMJ.RY0402.082566_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.082566
Chromosome:chromosome 4
Location:3345348
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g227301 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCGCAGTGTTCATGCGCATGTCAGTGTC
Internal bar code:CAAGTTATCTACTCGGTACCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:546
LEAP-Seq percent confirming:99.6482
LEAP-Seq n confirming:4249
LEAP-Seq n nonconfirming:15
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:TGTGAATGAATACGGAGCCA
Suggested primer 2:TTCTTCAGCGTGGACATCTG