Insertion junction: LMJ.RY0402.082649_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.082649
Chromosome:chromosome 6
Location:6359559
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g292100 (1 of 1) PTHR30222//PTHR30222:SF3 - SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGGGCACAAAGTCGAGGGGTGCCAGTGAC
Internal bar code:GTATAGTGTCGCATCTCGGTTT

Confirmation - LEAP-Seq

LEAP-Seq distance:747
LEAP-Seq percent confirming:99.1132
LEAP-Seq n confirming:4694
LEAP-Seq n nonconfirming:42
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTCCTGTTGCTCTGTGG
Suggested primer 2:CTTCTGGCGACCTTCACTTC