Insertion junction: LMJ.RY0402.082649_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.082649
Chromosome:chromosome 6
Location:6359564
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre06.g292100 (1 of 1) PTHR30222//PTHR30222:SF3 - SPERMIDINE/PUTRESCINE-BINDING PERIPLASMIC PROTEIN // SUBFAMILY NOT NAMED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTCTGCATGCCTGCCCACGCCGCCCACGC
Internal bar code:AGTTTTGATGCGCCGGGCCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:606
LEAP-Seq percent confirming:99.4077
LEAP-Seq n confirming:2182
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:CATGTCCTGTTGCTCTGTGG
Suggested primer 2:CTTCTGGCGACCTTCACTTC