Insertion junction: LMJ.RY0402.082678_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.082678
Chromosome:chromosome 13
Location:3191717
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g585450 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTACCGGTTCTCACCGTACGGCAGAATGGC
Internal bar code:TAGGATTGACCCACTGAAGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:500
LEAP-Seq percent confirming:97.8431
LEAP-Seq n confirming:1996
LEAP-Seq n nonconfirming:44
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CATCGATACTGGCGGTTCTT
Suggested primer 2:CAGTGGCACGTAATTGATGG