Insertion junction: LMJ.RY0402.082909_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.082909
Chromosome:chromosome 1
Location:3796334
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g024500 (1 of 1) K16484 - rotatin (RTTN) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGGCCCGGGCCCTGCTGGCGAGGCGGGC
Internal bar code:TTGCACACCCGGGCCGCGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:275
LEAP-Seq percent confirming:97.0606
LEAP-Seq n confirming:1585
LEAP-Seq n nonconfirming:48
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ATACCGTATCTGGCGCTGTC
Suggested primer 2:TGTGGTGAAGATCGGGGTAT