Insertion junction: LMJ.RY0402.083161_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.083161
Chromosome:chromosome 10
Location:1343820
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g427800 (1 of 3) IPR002889//IPR013994 - Carbohydrate-binding WSC // Carbohydrate-binding WSC, subgroup intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGACTGCACGCATGCAGGTTGTTTGCG
Internal bar code:CCTGTTCGGAGGGCGGAACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:206
LEAP-Seq percent confirming:67.9715
LEAP-Seq n confirming:1146
LEAP-Seq n nonconfirming:540
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:CCACGTGGTTCACACTTTTG
Suggested primer 2:CTTGCCCTTTTTGTTCTTGC