Insertion junction: LMJ.RY0402.083170_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.083170
Chromosome:chromosome 3
Location:4233605
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre03.g174100 (1 of 1) IPR013122//IPR015928 - Polycystin cation channel, PKD1/PKD2 // Aconitase/3-isopropylmalate dehydratase, swivel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTCGTGTTCGGTTCGGTTGCCGTTCCAAA
Internal bar code:CTTGGTGTAGTACTAGATAGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:501
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:132
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:3

Suggested primers for confirmation by PCR

Suggested primer 1:ACTGCGTGTGTCATCCATGT
Suggested primer 2:TCACAGCCGATCAACAGAAG