Insertion junction: LMJ.RY0402.083214_3

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.083214
Chromosome:chromosome 10
Location:1688539
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre10.g430150 REP27,LPA1 (1 of 1) PF11998//PF13414 - Protein of unknown function (DUF3493) (DUF3493) // TPR repeat (TPR_11); Low Photosystem II Accumulation 1 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAAGGACGGGACATGCGCGGGCATGCATTG
Internal bar code:GTCGAATGCATCGGGGTTGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:720
LEAP-Seq percent confirming:92.5409
LEAP-Seq n confirming:4640
LEAP-Seq n nonconfirming:374
LEAP-Seq n unique pos:20

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTGTTGCTTCCAGACTTC
Suggested primer 2:CCTGATGCTGTGAGTGTGCT