Insertion junction: LMJ.RY0402.083347_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.083347
Chromosome:chromosome 4
Location:2850736
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre04.g224300 CGL84 (1 of 22) PTHR10994 - RETICULON; Conserved in the Green Lineage intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGATGCCACACCGACTCAACCGCTCCCT
Internal bar code:AACAGGGTACGCACCCAAGGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:531
LEAP-Seq percent confirming:98.4127
LEAP-Seq n confirming:310
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CGTGTGACATGAACCGGTAG
Suggested primer 2:AGGTCTGGTTGGAAATGACG