Insertion junction: LMJ.RY0402.083628_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.083628
Chromosome:chromosome 1
Location:2635623
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g015350 POR1,POR Light-dependent protochlorophyllide reductase; (1 of 1) K00218 - protochlorophyllide reductase (E1.3.1.33, por) 5'UTR_intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCATACTTCTTATGGCATTGGTCAAGGAA
Internal bar code:ATGAAGTTGTAGGGCACTTGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:75
LEAP-Seq percent confirming:85.5556
LEAP-Seq n confirming:77
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:GCTCCAGTAAGTTCGCTTGG
Suggested primer 2:GAGGCCTTGAAGTTCTGCAC