Insertion junction: LMJ.RY0402.083715_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.083715
Chromosome:chromosome 1
Location:2649070
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre01.g015500 CGL91 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED; Conserved in the Green Lineage CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGGTACGTGGCGGGTTTGTTTTGCGTG
Internal bar code:TTGGATAACGACGGGCGGGTAT

Confirmation - LEAP-Seq

LEAP-Seq distance:383
LEAP-Seq percent confirming:98.916
LEAP-Seq n confirming:2190
LEAP-Seq n nonconfirming:24
LEAP-Seq n unique pos:6

Suggested primers for confirmation by PCR

Suggested primer 1:TAGAGCGCTTTTGGTGACCT
Suggested primer 2:GCAAGACTCTTCCATCTGCC