Insertion junction: LMJ.RY0402.083798_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.083798
Chromosome:chromosome 4
Location:1353598
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g214501 PNP1,PNT2 Chloroplast polyribonucleotide phosphorylase; (1 of 1) 2.7.7.8 - Polyribonucleotide nucleotidyltransferase / Polynucleotide phosphorylase 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATCGCCTCGACTCACACGCACGCCGCAAG
Internal bar code:ACGTGGCGCTCGTATTGGGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:93
LEAP-Seq percent confirming:9.81292
LEAP-Seq n confirming:278
LEAP-Seq n nonconfirming:2555
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:TTGACTCGTCACAAACTGCC
Suggested primer 2:TGGTTCAGAGAAGTGTTGCG