Insertion junction: LMJ.RY0402.083871_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.083871
Chromosome:chromosome 9
Location:2586027
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre09.g390550 5'UTR_intron|intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCTGGTGCAGGTGGGCGGGCGGGGGGTGG
Internal bar code:CCAATCGACTTGGAGCAGCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:83
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AGCCCTTTGCACTGCTCTAC
Suggested primer 2:CCTGCTTCCTCACCTCTGAC