Insertion junction: LMJ.RY0402.083902_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.083902
Chromosome:chromosome 4
Location:1816606
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre04.g211850 ELI5,ELIP5 Early light-induced LHC-like protein; (1 of 6) PTHR14154//PTHR14154:SF5 - UPF0041 BRAIN PROTEIN 44-RELATED // EARLY LIGHT-INDUCED PROTEIN 1, CHLOROPLASTIC-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCGCCCCCGCCGTGGCCGGCCGCGTGCCCG
Internal bar code:CGTAACTGCTCGGGGAGGCTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:596
LEAP-Seq percent confirming:93.159
LEAP-Seq n confirming:926
LEAP-Seq n nonconfirming:68
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCTGGTTTAGGCTGGGTG
Suggested primer 2:TAAGGCTGCTAACCACCACC