Insertion junction: LMJ.RY0402.084142_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.084142
Chromosome:scaffold 35
Location:29830
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre35.g759447 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGGGCGGCGGAACGTTTGTGAGCAACA
Internal bar code:ATGACCTGGTGGACCCATAGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:139
LEAP-Seq percent confirming:70.6383
LEAP-Seq n confirming:332
LEAP-Seq n nonconfirming:138
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GAGAACGTGTGGTGGATGTG
Suggested primer 2:ACACTTGTCCGTCACCATCA