Insertion junction: LMJ.RY0402.084149_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.084149
Chromosome:chromosome 9
Location:5852767
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre09.g402293 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGAAGGTACTCCTGCATGACCTTCCGGCA
Internal bar code:TGTGCTTGAAGGATTACTTCGC

Confirmation - LEAP-Seq

LEAP-Seq distance:273
LEAP-Seq percent confirming:87.7778
LEAP-Seq n confirming:237
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:GGAGCGTATATGGCACATGA
Suggested primer 2:CCTTCCAGTCTTGCTTCCAG