Insertion junction: LMJ.RY0402.084340_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.084340
Chromosome:scaffold 24
Location:83105
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre24.g755747 (1 of 781) IPR000104 - Antifreeze protein, type I 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACGGGGGCACCCCTAGGGGCTAGGGGTGTC
Internal bar code:TGGGCCCTAGACACACTCTGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:320
LEAP-Seq percent confirming:99.0726
LEAP-Seq n confirming:3098
LEAP-Seq n nonconfirming:29
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:TTGTTATACGGGTGGGTGGT
Suggested primer 2:ATGCTGGATTTGTCCAGGTC