Insertion junction: LMJ.RY0402.084382_2

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.084382
Chromosome:chromosome 5
Location:2613749
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g236250 Conserved WD40-repeat Protein; (1 of 2) PTHR22847//PTHR22847:SF459 - WD40 REPEAT PROTEIN // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTACATATGGTACGTCCAGGGCCATGCCA
Internal bar code:TGATCGAATCTGGATGCATTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:180
LEAP-Seq percent confirming:73.7798
LEAP-Seq n confirming:8737
LEAP-Seq n nonconfirming:3105
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:ACACGTGGTCCTTAGTTGCC
Suggested primer 2:TCGGGATTATGGCTATCTCG