Insertion junction: LMJ.RY0402.084442_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.084442
Chromosome:chromosome 13
Location:4788615
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre13.g605100 PDE20 (1 of 1) PF00233//PF01590 - 3'5'-cyclic nucleotide phosphodiesterase (PDEase_I) // GAF domain (GAF); 3'%252C5'-cyclic-nucleotide phosphodiesterase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGGCCAGCACCAGCAGTCGCAGCTCCGGT
Internal bar code:GACTCCAAGCGCTTTGCGGGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:359
LEAP-Seq percent confirming:99.7041
LEAP-Seq n confirming:337
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGGCATTGTACATGGAAG
Suggested primer 2:TGCTTCTGTGTGTGGGTAGC