Insertion junction: LMJ.RY0402.084476_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.084476
Chromosome:chromosome 5
Location:1963869
Confidence (%):73
Locus systematic id Locus common name Defline Feature
Cre05.g241638 (1 of 1) IPR000253//IPR002562//IPR012337 - Forkhead-associated (FHA) domain // 3'-5' exonuclease domain // Ribonuclease H-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCAAGCACCCTGCGCCCTTGGAAACGCGG
Internal bar code:ACCGATGCGCCTGACCGCCAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:277
LEAP-Seq percent confirming:78.0095
LEAP-Seq n confirming:823
LEAP-Seq n nonconfirming:232
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:AACACCCATTGTCAAGGCTC
Suggested primer 2:AAAGTGCTCTACCTGCGGAA