Insertion junction: LMJ.RY0402.084499_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:-
Strain:LMJ.RY0402.084499
Chromosome:chromosome 10
Location:3699329
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g446100 TRX6,TRXY,TRXY1 Thioredoxin y, chloroplastic; (1 of 1) PTHR10438:SF280 - THIOREDOXIN Y1, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCACTTCGTCACCATCGCCCACATATGACA
Internal bar code:GCTATTACAGTGTGGGGAATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:506
LEAP-Seq percent confirming:99.661
LEAP-Seq n confirming:294
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGGACACGATCAAGGAA
Suggested primer 2:GTTGATTACGCCGGAACAGT