Insertion junction: LMJ.RY0402.084499_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.084499
Chromosome:chromosome 10
Location:3699336
Confidence (%):95
Locus systematic id Locus common name Defline Feature
Cre10.g446100 TRX6,TRXY,TRXY1 Thioredoxin y, chloroplastic; (1 of 1) PTHR10438:SF280 - THIOREDOXIN Y1, CHLOROPLASTIC-RELATED 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTGGTACATGGAAGCCATGGGTTTCCA
Internal bar code:CGACGCGGACTGGGGAGTCGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:738
LEAP-Seq percent confirming:98.8717
LEAP-Seq n confirming:1402
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:TGATGGACACGATCAAGGAA
Suggested primer 2:GTTGATTACGCCGGAACAGT