Insertion junction: LMJ.RY0402.084508_2

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:+
Strain:LMJ.RY0402.084508
Chromosome:scaffold 19
Location:89197
Confidence (%):95
Locus systematic id Locus common name Defline Feature
intergenic

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGCCGGTGCGAGGGCCCCGCTGGCGCCCA
Internal bar code:AACGGTGTGTCGTGCGGGCGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:336
LEAP-Seq percent confirming:82.0648
LEAP-Seq n confirming:50126
LEAP-Seq n nonconfirming:10955
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:CAACTGGGGTTCTGGAAAAA
Suggested primer 2:AGTGGGATGCGTGTTAGGTC