Insertion junction: LMJ.RY0402.084533_1

Overview

Insertion cassette:CIB1
Side of cassette:5'
Strand:+
Strain:LMJ.RY0402.084533
Chromosome:chromosome 4
Location:615396
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre04.g217942 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGTTGCCATCAGCCCTGCGGGTCCCAGTAC
Internal bar code:ATTTTTCGTTTACTTTTGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:937
LEAP-Seq percent confirming:54.8622
LEAP-Seq n confirming:677
LEAP-Seq n nonconfirming:557
LEAP-Seq n unique pos:4

Suggested primers for confirmation by PCR

Suggested primer 1:TGTCTGGTCTGGTAGCGTTG
Suggested primer 2:CAAGGTAACCCGCCTTTGTA