Insertion junction: LMJ.RY0402.085004_1

Overview

Insertion cassette:CIB1
Side of cassette:3'
Strand:-
Strain:LMJ.RY0402.085004
Chromosome:chromosome 1
Location:1487050
Confidence (%):58
Locus systematic id Locus common name Defline Feature
Cre01.g007651 PUS10 (1 of 1) 5.4.99.27 - tRNA pseudouridine(13) synthase / tRNA Psi(13) synthase; RNA pseudouridine synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAACAGCCGCCGCGCCGCCGCGATGTCGG
Internal bar code:CAGCCTCAAACGTGCAGAAGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:307
LEAP-Seq percent confirming:27.1536
LEAP-Seq n confirming:145
LEAP-Seq n nonconfirming:389
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCTCCTTGCAACGCTTCT
Suggested primer 2:AACACCTTCGAGCTGCTGAT